Personal profile
Personal profile
Srijak is an Assistant Professor, Computational Biology and Microbial Ecology cross-appointed with the Centre of Science and School of Computing and Information Systems in the Faculty of Science and Technology. He is also an Adjunct Assistant Professor in the Department of Biological Sciences at the University of Calgary.
Before starting his position at Athabasca University, Srijak was a postdoctoral researcher at the University of Calgary. Here, he studied the microbial bioremediation of the Arctic Ocean, with a focus on establishing microbial baselines of Canada's Arctic Ocean.
Srijak got his PhD in Microbiology from the University of California Davis, where he studied the environmental drivers of microbial community structure and function under the supervision of Dr. Jonathan Eisen.
He also has an MS in Bioinformatics from Georgia Institute of Technology. Here he worked under the supervision of Dr. Joshua Weitz to develop one of the earliest k-mer-based metagenomic binning tools.
Srijak is also a strong advocate of Open Science and strives to publish all his research output in open-access venues. He is also passionate about science communication and outreach. As a member of Science Outreach Athabasca and a Research Associate with the Arctic Institute of North America, he is involved in knowledge mobilization and translation from high schools to stakeholders and Rightsholders.
His research lab (Enviromics group), is part of the GEMM research labs, co-led with Dr. Casey Hubert and Dr. Marc Strous at the University of Calgary.
Research Interests
Dr. Bhatnagar is an environmental microbiologist and bioinformatician, studying microbial ecology and function in terrestrial and aquatic ecosystems. His research group uses omics technologies to study environmental contamination and leverages microbial ecophysiological information for environmental monitoring and remediation in natural and controlled systems.
Education/Academic qualification
PhD, University of California at Davis
… → 2017
MS, Georgia Institute of Technology
… → 2007
External positions
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 6 Clean Water and Sanitation
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SDG 13 Climate Action
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SDG 14 Life Below Water
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SDG 15 Life on Land
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Collaborations and top research areas from the last five years
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Complete genome sequences of nine isolates from microplastics in the Bow River, Calgary, Canada
Goff, K. L., Suresh, S., Stadfeld, J. M. & Bhatnagar, S., May 2025, In: Microbiology Resource Announcements. 14, 5Research output: Contribution to journal › Journal Article › peer-review
Open Access -
Longitudinal monitoring of sewershed resistomes in socioeconomically diverse urban neighborhoods
Lee, J., Xiang, K., Au, E., Sarabi, S., Acosta, N., Bhatnagar, S., Van Doorn, J., Bertazzon, S., Conly, J. M., Rennert-May, E., Pitout, J. D. D., Lee, B. E., Pang, X., O’Grady, C., Frankowski, K., Hubert, C. R. J. & Parkins, M. D., Dec. 2025, In: Communications Medicine. 5, 1, 7.Research output: Contribution to journal › Journal Article › peer-review
Open Access2 Citations (Scopus) -
Metagenomic analysis after selective culture enrichment of hospital and community wastewater enhances antimicrobial resistance gene detection
Acosta, N., Lee, J., Bautista, M. A., Bhatnagar, S., Li, C., Waddell, B. J., Au, E., Pradhan, P., Clark, R. G., Meddings, J., Achari, G., Pitout, J. D., Conly, J., Frankowski, K., Hubert, C. R. J. & Parkins, M. D., 10 Sep. 2025, In: mBio. 16, 9, p. 1-21 21 p.Research output: Contribution to journal › Journal Article › peer-review
Open Access3 Citations (Scopus) -
Nitrate-reducing microorganisms prevent souring of an oil field produced water storage pond
Scheffer, G., Rattray, J., Evans, P., Shi, W., Bhatnagar, S. & Hubert, C. R. J., 1 May 2025, In: FEMS Microbiology Ecology. 101, 5, fiaf041.Research output: Contribution to journal › Journal Article › peer-review
Open Access1 Citation (Scopus) -
Coming Together to Talk about Genomics and DNA-based Tools for Umingmak (Muskox, Ovibos moschatus) Conservation: Muskox and Genomics in the Community (MAGIC) Workshop
Mishra, S., Crookes, S., Caudill, C. M., Marston, E. L., Kutz, S. J., Kyle, C. J., Pulsifer, P. L., Murray, M. S. & Bhatnagar, S., Dec. 2024, In: Arctic. 77, 4, p. 383-388 6 p.Research output: Contribution to journal › Journal Article › peer-review
Open Access
Press/Media
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Improving Arctic food security through DNA science and respectful collaboration with Indigenous Peoples
26/05/25
1 Media contribution
Press/Media
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Microplastics and microbes? AU prof breaks down minuscule molecules
9/02/25
1 item of Media coverage
Press/Media
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‘Plant probiotics’ a possible fix for restoring former coal mine
9/12/24
1 item of Media coverage
Press/Media
Datasets
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Author Correction: Microbial community dynamics and coexistence in a sulfide-driven phototrophic bloom
Bhatnagar, S. (Creator), Cowley, E. S. (Creator), Kopf, S. H. (Creator), Castro, S. P. (Creator), Kearney, S. (Creator), Dawson, S. C. (Creator), Hanselmann, K. (Creator) & Ruff, S. E. (Creator), 2023
DOI: 10.6084/m9.figshare.c.6593249.v1, https://springernature.figshare.com/collections/Author_Correction_Microbial_community_dynamics_and_coexistence_in_a_sulfide-driven_phototrophic_bloom/6593249/1
Dataset
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Author Correction: Microbial community dynamics and coexistence in a sulfide-driven phototrophic bloom
Bhatnagar, S. (Creator), Cowley, E. S. (Creator), Kopf, S. H. (Creator), Castro, S. P. (Creator), Kearney, S. (Creator), Dawson, S. C. (Creator), Hanselmann, K. (Creator) & Ruff, S. E. (Creator), 2023
DOI: 10.6084/m9.figshare.c.6593249, https://springernature.figshare.com/collections/Author_Correction_Microbial_community_dynamics_and_coexistence_in_a_sulfide-driven_phototrophic_bloom/6593249
Dataset